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Identification of Ubiquinol Binding Motifs at the Qo-Site of the Cytochrome bc1 Complex; Image credit: Angela M. Barragan, Klaus Schulten, Ilia A. Solov'yov. URL: <a href='http://pubs.acs.org/doi/abs/10.1021/jp510022w'>http://pubs.acs.org/doi/abs/10.1021/jp510022w</a>

Efficient 3D Kinetic Monte Carlo Method for Modeling of Molecular Structure and Dynamics. Image credit: Mikhail Panshenskov, Ilia A. Solov'yov and Andrey V. Solov'yov. URL: <a href='http://onlinelibrary.wiley.com/doi/10.1002/jcc.23613/abstract'>http://onlinelibrary.wiley.com/doi/10.1002/jcc.23613/abstract</a>.

An Introduction to Cluster Science. Image credit: Paul-Gerhard Reinhard, Eric Suraud, Phuong Mai Dinh, Ilia A. Solov'yov, Andrey V. Solov'yov. URL: <a href='http://www.wiley.com/WileyCDA/WileyTitle/productCd-3527411186.html'>http://www.wiley.com/WileyCDA/WileyTitle/productCd-3527411186.html</a>.

An atomic model of the human immunodeficiency virus-1 (HIV-1) capsid within a representation of the viral envelope. Image credit: Juan R. Perilla, John Stone, Ilia A. Solov'yov, Olga Svinarski, Klaus Schulten and Peijun Zhang. URL: <a href='http://www.nature.com/nature/journal/v497/n7451/index.html'>http://www.nature.com/nature/journal/v497/n7451/index.html</a>

Decrypting Cryptochrome: Revealing the Molecular Identity of the Photoactivation. Image credit: Ilia A. Solov'yov, Tatiana Domratcheva, Abdul Rehaman Moughal Shahi, and Klaus Schulten. URL: <a href='http://pubs.acs.org/doi/abs/10.1021/ja3074819'>http://pubs.acs.org/doi/abs/10.1021/ja3074819</a>

MesoBioNano Explorer — A universal program for multiscale computer simulations of complex molecular structure and dynamics. Image credit: Ilia A. Solov'yov, Alexander V. Yakubovich, Pavel V. Nikolaev, Ilya Volkovets, Andrey V. Solov'yov. URL: <a href='http://onlinelibrary.wiley.com/doi/10.1002/jcc.23086/abstract'>http://onlinelibrary.wiley.com/doi/10.1002/jcc.23086/abstract</a>

Vibrationally assisted electron transfer mechanism of olfaction: myth or reality? Image credit: Ilia A. Solov'yov, Po-Yao Chang, and Klaus Schulten. URL: <a href='http://www.ncbi.nlm.nih.gov/pubmed/22899100'>http://www.ncbi.nlm.nih.gov/pubmed/22899100</a>

How birds and other animals orient in the Earth magnetic field. Image credit: Ilia A. Solov'yov, Klaus Schulten, and Walter Greiner. Physik Journal, 9:23-28, 2010

Magnetoreception through cryptochrome may involve superoxide. Image credit: Ilia A. Solov'yov and Klaus Schulten. Biophysical Journal, 96:4804-4813, 2009.

Publications

Year

Title

Author(s)

Abstract contains

Journal(s)

How do Antimicrobial Peptides Interact with the Outer Membrane of Gram-Negative Bacteria? Role of Lipopolysaccharidesin Peptide Binding, Anchoring, and Penetration, Justus C. Stephani, Luca Gerhards, Bishoy Khairalla, Ilia A. Solov'yov, Izabella Brand, ACS Infectious Diseases, 10, 763-778, (2024)

MBN Explorer and MBN Studio Tutorials: Version 5.0, Alexey Verkhovtsev, Ilia A. Solov'yov, Andrei V. Korol, Gennady B. Sushko, Andrey V. Solov'yov, Frankfurt am Main, Germany, MesoBioNano Science Publishing, (2024)

Cryptochrome magnetoreception: Time course of photoactivation from non-equilibrium coarse-grained molecular dynamics, Jessica L. Ramsay, Fabian Schuhmann, Ilia A. Solov'yov, Daniel R. Kattnig, Computational and Structural Biotechnology Journal, 26, 58-69, (2024)

Spin Dynamics of Radical Pairs Using the Stochastic Schrödinger Equation in MolSpin, Gediminas Jurgis Pa\vzera, Thomas P. Fay, Ilia A. Solov'yov, P. J. Hore, Luca Gerhards, Journal of Chemical Theory and Computation, 20, 8412-8421, (2024)

Quantum phenomena in biological system, Pedro H. Alvarez, Luca Gerhards, Ilia A. Solov'yov, Marcos C. de Oliveira, Frontiers in Quantum Science and Technology, 3, 1466906-(1-13), (2024)

Nuclear hyperpolarization in electron-transfer proteins: Revealing unexpected light-induced 15N signals with field-cycling magic-angle spinning NMR, Patrick Kurle-Tucholski, Luca Gerhards, Yonghong Ding, Yunmi Kim, Irina S. Anisimova, A. Alia, Ilia A. Solov'yov, Jörg Matysik, Journal of Magnetic Resonance Open, 21, 100168, (2024)

Spurious negative eigenvalues of numerical variance-covariance matrices in many-body systems correlate with the existence of frozen degrees of freedom, Jonathan Hungerland, Ilia A. Solov'yov, Fabian Schuhmann, Physica Scripta, 99, 085249-(1-8), (2024)

External RF-EMF alters cell number and ROS balance possibly via the regulation of NADPH metabolism and apoptosis, Sheung-Ching Chow, Yang Zhang, Raymond W. M. Ng, Shu-Yuen Ron Hui, Ilia A. Solov'yov, Wing-Yee Lui, Frontiers in Public Health, 12, 1425023-(1-11), (2024)

A Computer Laboratory for the Calculation of the Heat Capacity of a Peptide Unfolding Transition, Lau Blom Grøndahl, Fabian Schuhmann, Dennis Bruhn, Vikas Dubey, Ilia A. Solov'yov, Himanshu Khandelia, The Biophysicist, 5, 67-80, (2024)

Condensed Matter Systems Exposed to Radiation: Multiscale Theory, Simulations, and Experiment, Andrey V. Solov'yov, Alexey V. Verkhovtsev, Nigel J. Mason, Richard A. Amos, Ilko Bald, Gérard Baldacchino, Brendan Dromey,Martin Falk, Juraj Fedor, Luca Gerhards, Michael Hausmann, Georg Hildenbrand, Miloš Hrabovsk\'y, Stanislav Kadlec, Jaroslav Kočišek, Franck Lépine, Siyi Ming, Andrew Nisbet, Kate Ricketts, Leo Sala, Thomas Schlathölter, Andrew E. H. Wheatley, Ilia A. Solov'yov, Chemical Reviews, 124, 8014-8129, (2024)