Phase transitions in finite bio-nano-systems

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Imagine you're in the kitchen, boiling eggs in water. As the water heats up, you'll see wisps of steam rising – a clear sign of water molecules transitioning from the liquid phase to the gas phase due to the increased heat. But here's the fascinating twist: not just the water undergoing a phase transition; the proteins inside the egg are also part of this intricate dance. Initially, the liquid egg-white cradles solvated proteins in a stable equilibrium structure. However, when you apply heat by boiling the water, these proteins embark on their phase transition journey, forming the solid egg whites we associate with boiled eggs.

This captivating world of phase transitions in biological systems goes well beyond the kitchen. It encompasses processes like the intricate folding of amino acid chains into functional proteins, the twisting of DNA strands that shape our genomes, or even the self-assembly of carbon nanotubes. Our mission in this realm is to develop cutting-edge theoretical approaches based on the principles of statistical physics to describe and understand these molecular-scale phase transitions precisely. It all starts with two distinct equilibrium states of the same system, and our goal is to unravel the complex transformation journey between them, unlocking the secrets of these remarkable bio-nano systems.

Recent Publications

Conformational changes in glycine tri- and hexapeptide, Yakubovich, Alexander V., Solov'yov, Ilia A., Solov'yov, Andrey V., Greiner, Walter, The European Physical Journal D, 39, 23 — 34, (2006)
Ab initio study of alanine polypeptide chain twisting, Ilia A. Solov'yov, Alexander V. Yakubovich, Andrey V. Solov'yov, Walter Greiner, Physical Review E, 73, 021916-(1-10), (2006)
Conformations of glycine polypeptides, Alexander V. Yakubovich, Ilia A. Solov'yov, Andrey V. Solov'yov, Walter Greiner, Russian Journal of Physical Chemistry B, 25, 11 — 23, (2006)
Potential energy surface of alanine polypeptide chains, Ilia A. Solov'yov, Alexander V. Yakubovich, Andrey V. Solov'yov, Walter Greiner, Journal of Experimental and Theoretical Physics, 102, 314 — 326, (2006)